| MirGeneDB ID | Esc-Novel-13 |
|---|
| Family name |
COL-NOVEL-13 (all species) |
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| Seed |
UAGCUGU |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-13
Ovu-Novel-13
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-13_pre_SRIE01053856.1:631011-631156: 46-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAACUUGCUGAGACUGUUUGCUUGGGACUGACGGUGAUGAGAUCAGUUUGUCUUAUAAAAUUCGAUUAGCUGUCUCAUGAUCUUCAGCCCGUUGCUUACUGGCAUCAUUGCAGCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAACUUGCUGAGACUGUUU-- U-| A C G U U UUAUA
GC UGGG CUGA GGU AUGAGA CAGUU GUC \
CG GCCC GACU CUA UACUCU GUCGA UAG A
ACCGACGUUACUACGGUCAUU UU^ - U G - U CUUAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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|
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| Star sequence |
Esc-Novel-13_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACGGUGAUGAGAUCAGUUUGUC -22
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-13_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UUAGCUGUCUCAUGAUCUUCA -56
Get sequence
|
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