| MirGeneDB ID | Esc-Novel-10 |
|---|
| Family name |
ESC-NOVEL-10 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
|
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
|
|---|
Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044508.1: 64196621-64196674 [+]
Ensembl
|
|---|
| Seed |
GUUGGAC |
|---|
Precursor
(pre-Mir +30nt flank) |
UGAAUUAAGUUCAGUGGCAGCGGCAAGUAGUGUUGGACGGCGGUCGGGCGGGAGGCGUUAGCUCGCUCGCCACGGUCCAUCGCUCUUUGCUGCUUAAAUACUACAUUAAUUUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGAAUUAAGUUCAGUGGC-- U U ---| GU GGGAG
AGCGGCAAG AGUG UGGAC GGCG CGGGC \
UCGUCGUUU UCGC ACCUG CCGC GCUCG G
UUUUUAAUUACAUCAUAAAU C U GCA^ UC AUUGC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Esc-Novel-10_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUGGACGGCGGUCGGGCGGGA -23
Get sequence
|
|---|
| Star sequence |
Esc-Novel-10_3p* |
| mirBase accession | None |
|---|
| Sequence |
32- UCGCUCGCCACGGUCCAUCGCU -54
Get sequence
|
|---|
