MirGeneDB 3.0

MirGeneDB ID

Esc-Mir-12529

Family name MIR-12529 (all species)
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Obi-Mir-12529  Ovu-Mir-12529 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(esc-GCA_024364805.1_ASM2436480v1)
CM044489.1: 112609561-112609621 [+] Ensembl
Seed UGUUGAC
Precursor
(pre-Mir +30nt flank)
CCGAGACCUGCACUAAUAUAUCGUCUGAACCGAUGGAUUUGUUACGUGACUCGAUGGUAUAUUGCGACAUUGUUGACGUAACACCAUUGCCCAGAGAUAUAUCAUCUCACAUGUCUGGGGG
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Structure
        10            20        30        40        50        60  
CCGAGACCUGCACUAAU----|    G    AAC      AUU        GACU    GGUAUA 
                     AUAUC UCUG   CGAUGG   UGUUACGU    CGAU      \
                     UAUAG AGAC   GUUACC   ACAAUGCA    GUUA      U
GGGGGUCUGUACACUCUACUA^    -    CC-      ---        GUU-    CAGCGU 
 .       110       100         90            80         70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
- +
Li
Star sequence

Esc-Mir-12529_5p*

mirBase accessionNone
Sequence
0- CGAUGGAUUUGUUACGUGACUCGAU -25
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Mature sequence

Esc-Mir-12529_3p

mirBase accessionNone
Sequence
39- UUGUUGACGUAACACCAUUGCC -61
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