MirGeneDB ID | Esc-Mir-12529 |
Family name |
MIR-12529 (all species) |
Species |
Hawaiian bobtail squid (Euprymna scolopes) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Obi-Mir-12529
Ovu-Mir-12529
|
Node of Origin (locus) |
Coleoidea
|
Node of Origin (family) |
Coleoidea
|
Genome context (esc-GCA_024364805.1_ASM2436480v1) |
CM044489.1: 112609561-112609621 [+]
Ensembl
|
Seed |
UGUUGAC |
Precursor (pre-Mir +30nt flank) |
CCGAGACCUGCACUAAUAUAUCGUCUGAACCGAUGGAUUUGUUACGUGACUCGAUGGUAUAUUGCGACAUUGUUGACGUAACACCAUUGCCCAGAGAUAUAUCAUCUCACAUGUCUGGGGG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCGAGACCUGCACUAAU----| G AAC AUU GACU GGUAUA
AUAUC UCUG CGAUGG UGUUACGU CGAU \
UAUAG AGAC GUUACC ACAAUGCA GUUA U
GGGGGUCUGUACACUCUACUA^ - CC- --- GUU- CAGCGU
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Esc-Mir-12529_5p* |
mirBase accession | None |
Sequence |
0- CGAUGGAUUUGUUACGUGACUCGAU -25
Get sequence
|
Mature sequence |
Esc-Mir-12529_3p |
mirBase accession | None |
Sequence |
39- UUGUUGACGUAACACCAUUGCC -61
Get sequence
|