MirGeneDB ID | Esc-Mir-12510 |
Family name |
MIR-12510 (all species) |
Species |
Hawaiian bobtail squid (Euprymna scolopes) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Obi-Mir-12510
Ovu-Mir-12510
|
Node of Origin (locus) |
Coleoidea
|
Node of Origin (family) |
Coleoidea
|
Genome context (esc-GCA_024364805.1_ASM2436480v1) |
CM044510.1: 94470228-94470283 [-]
Ensembl
|
Seed |
UAGCUGU |
Precursor (pre-Mir +30nt flank) |
AAACUUGCUGAGACUGUUUGCUUGGGACUGACGGUGAUGAGAUCAGUUUGUCUUAUAAAAUUCGAUUAGCUGUCUCAUGAUCUUCAGCCCGUUGCUUACUGGCAUCAUUGCAGCCA
Get precursor sequence
|
Structure | 10 20 30 40 50
AAACUUGCUGAGACUGUUU-- U-| A C G U U UUAUA
GC UGGG CUGA GGU AUGAGA CAGUU GUC \
CG GCCC GACU CUA UACUCU GUCGA UAG A
ACCGACGUUACUACGGUCAUU UU^ - U G - U CUUAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Esc-Mir-12510_5p* |
mirBase accession | None |
Sequence |
0- ACGGUGAUGAGAUCAGUUUGUC -22
Get sequence
|
Mature sequence |
Esc-Mir-12510_3p |
mirBase accession | None |
Sequence |
35- UUAGCUGUCUCAUGAUCUUCA -56
Get sequence
|