| MirGeneDB ID | Esc-Mir-12509 |
|---|
| Family name |
MIR-12509 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Npo-Mir-12509
Obi-Mir-12509
Ovu-Mir-12509
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
|---|
Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044498.1: 80598047-80598103 [-]
Ensembl
|
|---|
| Seed |
UUGGCAU |
|---|
Precursor
(pre-Mir +30nt flank) |
ACUACAGAAGAUACCCGGCUGGAAGGUGUGUUUGGCAUGGCAACCGCUUUGUGUCUACGUCAUCACUAGUCGUUGACAUGCGCAACACGUACUCCCAGACAUUGUACAUCGUGUUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACUACAGAAGAUACCCGG- A GU-| U - G C UU GUCUA
CUGG AG GUGUU G GCAUG CAAC GCU GU C
GACC UC CACAA C CGUAC GUUG UGA CA G
CUUUGUGCUACAUGUUACA C AUG^ - G A C U- CUACU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Esc-Mir-12509_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUUGGCAUGGCAACCGCUUUGU -22
Get sequence
|
|---|
| Star sequence |
Esc-Mir-12509_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CUAGUCGUUGACAUGCGCAACA -57
Get sequence
|
|---|
