| MirGeneDB ID | Ebu-Mir-181-P1f |
|---|
| Family name |
MIR-181 (all species) |
|---|
| Seed |
ACAUUCA |
|---|
| Species |
Inshore hagfish (Eptatretus burgeri) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Ebu-Mir-181-P1e
Ebu-Mir-181-P2e
Ebu-Mir-181-P2f
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
E. burgeri
|
|---|
| Node of Origin (family) |
Vertebrata
|
|---|
Genome context
(Eburgeri_3) |
FYBX02010771.1: 2873723-2873783 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGUGUAGAUUGCCCCAUGGAAGCUUUGAGGAACAUUCAACGCUGUCGGUGAGUUUUGGUGAAAAAUUAAACCAUCGACCGUUGACUGUACCUCACAGCUAUCCAAAGCUUGGCCAAAUAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGUGUAGAUUGCCCCAU- -| U A U CU A UUUGGUG
GGA AGCU UGAGG ACA UCAACG GUCGGUG GU A
CCU UCGA ACUCC UGU AGUUGC CAGCUAC CA A
CAAUAAACCGGUUCGAAA A^ C A C -- - AAUUAAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Ebu-Mir-181-P1f_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AACAUUCAACGCUGUCGGUGAGU -23
Get sequence
|
|---|
| Star sequence |
Ebu-Mir-181-P1f_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- ACCAUCGACCGUUGACUGUACC -61
Get sequence
|
|---|
