| MirGeneDB ID | Ebu-Mir-130-P1g |
|---|
| Family name |
MIR-130 (all species) |
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| Species |
Inshore hagfish (Eptatretus burgeri) |
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| MiRBase ID |
|
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| Paralogues |
Ebu-Mir-130-P1e
Ebu-Mir-130-P1f
Ebu-Mir-130-P2e
Ebu-Mir-130-P4e
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
E. burgeri
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(Eburgeri_3) |
FYBX02010190.1: 8151303-8151362 [-]
UCSC
Ensembl
|
|---|
| Seed |
AGUGCAA |
|---|
Precursor
(pre-Mir +30nt flank) |
UCCUUGUUUUUCCAACUUCCACGUGCCUGUGCCCUUUUCUUGUUGCACGGCUGUUAUUUCUGUACAAGUAGUGCAAUUUGAAAAGGGCAUCGGAAUGUGGAGCCAUCACACUGUGUGCGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCCUUGUUUUUCCAACU--| G U UU G GUUAUU
UCCACGU CC GUGCCCUUUUC GUUGCAC GCU U
AGGUGUA GG UACGGGAAAAG UAACGUG UGA C
UGCGUGUGUCACACUACCG^ A C UU A ACAUGU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Ebu-Mir-130-P1g_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GCCCUUUUCUUGUUGCACGGCU -22
Get sequence
|
|---|
| Mature sequence |
Ebu-Mir-130-P1g_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UAGUGCAAUUUGAAAAGGGCAU -60
Get sequence
|
|---|
