MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-974

Family name MIR-974 (all species)
Seed AGCGAGC
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Dan-Mir-974  Dme-Mir-974  Dsi-Mir-974 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Dmoj_caf1)
AAPU01008234.1: 40-103 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
NNNNUCAAUCAGACGCUGGGCAUUCCCUCUGAGCGAGCAGAGAAGUAUUAUUUGCGUGCAUCUGAUAUCAAAUAAAACUUUUUUGGUUGCUGCGAGGUAUUGUUGAAAUGUAAACGUUGCUCGC
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Structure
        10          20        30        40        50        60 
NNNNUCAAUCAGACGCUG--|   UUC    UG     G         A    UUGCGUGCA 
                    GGCA   CCUC  AGCGA CAGAGAAGU UUAU         U
                    UUGU   GGAG  UCGUU GUUUUUUCA AAUA         C
CGCUCGUUGCAAAUGUAAAG^   UAU    CG     G         A    AACUAUAGU 
  120       110       100        90        80        70
Deep sequencing
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CommentThere is a deletion in the 3p arm in the assembly relative to the read and because of the misassembly this mistake has been fixed in an edited trace.
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-974_5p

mirBase accessionNone
Sequence
0- GAGCGAGCAGAGAAGUAUUAU -21
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Star sequence

Dmo-Mir-974_3p* (predicted)

mirBase accessionNone
Sequence
43- AAAACUUUUUUGGUUGCUGCG -64
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