| MirGeneDB ID | Dmo-Mir-955 |
|---|
| Family name |
MIR-955 (all species) |
|---|
| Species |
Fruit fly (Drosophila mojavensis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Dan-Mir-955
Dme-Mir-955
Dsi-Mir-955
Dya-Mir-955
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
|---|
Genome context
(Dmoj_caf1) |
scaffold_6680: 1909643-1909703 [-]
Ensembl
|
|---|
| Seed |
AUCGUGC |
|---|
Precursor
(pre-Mir +30nt flank) |
CUCAGGUAUCCAAUAUGGGUUAGCGAGCUCCAUCGUGCACAGGUUUGAGUGUUUGUGUUUGGCUAGUCGCAUUCAGCCUUUGAACGGUAGAGAUGGCCAACUGAAAAGCGACCUAACUGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUCAGGUAUCCAAUAUG--| A GAG C G C U UUGUGUU
GGUU GC CUC AUCGU CA AGGUU GAGUGU U
UCAA CG GAG UGGCA GU UCCGA CUUACG G
AAGUCAAUCCAGCGAAAAG^ C GUA A A U - CUGAUCG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dmo-Mir-955_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CAUCGUGCACAGGUUUGAGUGUU -23
Get sequence
|
|---|
| Star sequence |
Dmo-Mir-955_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- CAUUCAGCCUUUGAACGGUAGA -61
Get sequence
|
|---|
