MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-983-P1

Family name MIR-983 (all species)
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-983-2
Paralogues Dme-Mir-983-P2 
Orthologues Dsi-Mir-983 
Node of Origin (locus) D. melanogaster
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_melanogaster_BDGP6)
X: 4368325-4368382 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-983-P1)
Mir-982 X: 4365822-4365883 [-] UCSC Ensembl
Mir-303 X: 4366184-4366240 [-] UCSC Ensembl
Mir-983-P1 X: 4368325-4368382 [-] UCSC Ensembl
Mir-983-P2 X: 4368325-4368382 [-] UCSC Ensembl
Mir-984 X: 4368660-4368720 [-] UCSC Ensembl
Seed UAAUACG
Precursor
(pre-Mir +30nt flank)
AUGCAUAUGCUAUUAUAUUGCAAUAAUUAAAUAAUACGUUUCGAACUAAUGAUUUUCAGUUCAUUCAUUAGGUAGUUACGCAUUAUCUAGUUGUUGUAAACAUUCAACUCGCUGGCGU
Get precursor sequence
Structure
        10          20        30        40        50        
AUGCAUAUGCUAUUAUA--|           A     A   UUCGAA       UUUUC 
                   UUGCAAUAAUUA AUAAU CGU      CUAAUGA     A
                   AAUGUUGUUGAU UAUUA GCA      GAUUACU     G
UGCGGUCGCUCAACUUACA^           C     C   UUGAUG       UACUU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-983-P1_5p

mirBase accessionMIMAT0005499
Sequence
0- AUAAUACGUUUCGAACUAAUGA -22
Get sequence
Proposed targets microrna.org: MIMAT0005499
TargetScanFly: dme-miR-983
Star sequence

Dme-Mir-983-P1_3p*

mirBase accessionMIMAT0020880
Sequence
36- AUUAGGUAGUUACGCAUUAUCU -58
Get sequence