MirGeneDB 2.1

MirGeneDB ID

Cli-Mir-9636

Family name MIR-9636 (all species)
Seed GCAAAAC
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-9636
Paralogues
Orthologues
Node of Origin (locus) C. livia
Node of Origin (family) C. livia
Genome context
(colLiv2)
scaffold1590: 232480-232547 [+]
Precursor
(pre-Mir +30nt flank)
GGUCGAACUGGAAACGUCGGCGCCGCUCCCCGCAAAACCAGUGGGUACCUUGUAGAAGGGACUGGUGGAGAGUGGACAAGUACCCGCUGGUUUGCUUGGGGAGGUGUCCGUGUUACUUCUUCAUAUCU
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Structure
        10         20         30          40        50        60    
GGUCGAACUGGAAACGU-   -|   GC     --     A           C    AGAAGGGACU 
                  CGG CGCC  UCCCC  GCAAA CCAGUGGGUAC UUGU          G
                  GCC GUGG  AGGGG  CGUUU GGUCGCCCAUG AACA          G
UCUAUACUUCUUCAUUGU   U^   --     UU     -           -    GGUGAGAGGU 
      120       110         100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-9636_5p

mirBase accessionMIMAT0038765
Sequence
0- CGCAAAACCAGUGGGUACCUUGUA -24
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Co-mature sequence

Cli-Mir-9636_3p

mirBase accessionMIMAT0038766
Sequence
46- CAAGUACCCGCUGGUUUGCUUG -68
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