| MirGeneDB ID | Cli-Mir-9633 |
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| Family name |
MIR-9633 (all species) |
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| Seed |
GAGGAUG |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9633
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. livia
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| Node of Origin (family) |
C. livia
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Genome context
(colLiv2) |
scaffold87: 761143-761206 [-]
|
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Precursor
(pre-Mir +30nt flank) |
GCCUGGCAGCAGCUCCGGGGCUCCACAUGCAGAGGAUGGAGCUGAAUGGGAUUUUGCUGCCUGAAAUGGUCCCAUCCAGCCCCAGUCCUGCUGCACGGGGAGGCAGAUGAGUGUGUGCUUGCCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCCUGGCAGCAGCUCCGGGG-- ACA - -| A A UUUUGCUG
CUCC UGCAG AGGA UGG GCUG AUGGGA C
GAGG ACGUC UCCU ACC CGAC UACCCU C
UCCGUUCGUGUGUGAGUAGACG GGC G G^ C C GGUAAAGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Cli-Mir-9633_5p |
| mirBase accession | MIMAT0038757 |
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| Sequence |
0- AGAGGAUGGAGCUGAAUGGGA -21
Get sequence
|
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| Star sequence |
Cli-Mir-9633_3p* |
| mirBase accession | MIMAT0038758 |
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| Sequence |
41- CCAUCCAGCCCCAGUCCUGCUGC -64
Get sequence
|
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