| MirGeneDB ID | Cli-Mir-9621 |
|---|
| Family name |
MIR-9621 (all species) |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9621
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. livia
|
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| Node of Origin (family) |
C. livia
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Genome context
(colLiv2) |
scaffold123: 6395738-6395795 [-]
|
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| Seed |
CCCGUUG |
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Precursor
(pre-Mir +30nt flank) |
UCUCGUCGGGAUACCUCCCAUCAGGAUACAUCCCGUUGGGAUGCAUUCUGUCAGAAUGCACCUCAUCAGGAUACAUCCCAUCGGGAUGCACCCCAUGGGGCAGCUCCCAGCUGUAGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUCGUCGGGAUACCUC---| CA AUA U C UCAGAAU
CCAU GG CAUCCCG UGGGAUG AUUCUG G
GGUA CC GUAGGGC ACCCUAC UAGGAC C
ACGAUGUCGACCCUCGACGG^ CC AC- U A UACUCCA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Cli-Mir-9621_5p |
| mirBase accession | MIMAT0038731 |
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| Sequence |
0- UCCCGUUGGGAUGCAUUCUGUC -22
Get sequence
|
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| Star sequence |
Cli-Mir-9621_3p* |
| mirBase accession | MIMAT0038732 |
|---|
| Sequence |
36- CAGGAUACAUCCCAUCGGGAUG -58
Get sequence
|
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