MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-4424

Family name MIR-4424 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-4424  Mml-Mir-4424  Pab-Mir-4424 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021932.1: 18120509-18120568 [-] UCSC Ensembl
Seed CCCAUUU
Precursor
(pre-Mir +30nt flank)		 
GAAAUUGGACCCUUAUCUUACAUCACACAUGAAGUUAACUUGACAUGGACUGACUUUUCCAUUAGUUAGCCCAUUUCAAGUUAAUUUUGUGUGUGAUGUAGUCCCAGCUACUCAGGAGGC
Get precursor sequence
Structure
        10          20        30        40        50         
GAAAUUGGACCCUUAUC--|           UG            C    A   ACUUUU 
                   UUACAUCACACA  AAGUUAACUUGA AUGG CUG      C
                   GAUGUAGUGUGU  UUUAAUUGAACU UACC GAU      C
CGGAGGACUCAUCGACCCU^           GU            U    C   UGAUUA 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-4424_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAAGUUAACUUGACAUGGACUG -22
Get sequence
Mature sequence

Cja-Mir-4424_3p (predicted)
mirBase accessionNone
Sequence 
38- GCCCAUUUCAAGUUAAUUUUGU -60
Get sequence