MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-3187

Family name MIR-3187 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-3187  Mml-Mir-3187  Pab-Mir-3187 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021936.1: 498263-498322 [+] UCSC Ensembl
Seed UGGCCAU
Precursor
(pre-Mir +30nt flank)		 
CGCGGGGUCGUCCAGCGAGGGCGCGCUGGCCCUGGGCAGCGUGUGGCUGAAGGUCACCAUGUUCUCCUUGGCCAUGGGGCUGCGCGGCGCCAGCAGGUCCACGUCCACGCUGGCGCGCUU
Get precursor sequence
Structure
        10          20        30        40         50         
CGCGGGGUCGUCCAGCGA--    GC      C   G     GU-|     G    UCACC 
                    GGGC  GCUGGC CUG GCAGC   GUGGCU AAGG     A
                    CCUG  CGACCG GGC CGUCG   UACCGG UUCC     U
UUCGCGCGGUCGCACCUGCA    GA      C   G     GGG^     -    UCUUG 
.       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Cja-Mir-3187_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUGGGCAGCGUGUGGCUGAAGG -23
Get sequence
Mature sequence

Cja-Mir-3187_3p
mirBase accessionNone
Sequence 
37- UUGGCCAUGGGGCUGCGCGGCGC -60
Get sequence