MirGeneDB 3.0

MirGeneDB ID

Cel-Mir-255

Family name MIR-255 (all species)
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-255
Paralogues
Orthologues Cbr-Mir-255 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)
chrV: 5440663-5440721 [+] UCSC Ensembl
Seed AACUGAA
Precursor
(pre-Mir +30nt flank)
AUUCUUCAGUGGUUCGACUAAAUUUUGGAGGUAAGAAAUCUUUGUAGUUCUCCGUAUUGUGACGUGAAAACUGAAGAGAUUUUUUACAGACUUCACAAAUUUGAAAUAUAUUCCUGCAA
Get precursor sequence
Structure
        10        20         30           40        50         
AUUCUUCAGUGGUUCGACUA     -     ---|            G     C  CGUAUU 
                    AAUUU UGGAG   GUAAGAAAUCUUU UAGUU UC      \
                    UUAAA ACUUC   CAUUUUUUAGAGA GUCAA AG      G
AACGUCCUUAUAUAAAGU--     C     AGA^            A     A  UGCAGU 
       110         100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-255_5p*

mirBase accessionMIMAT0020341
Sequence
0- GUAAGAAAUCUUUGUAGUUCUC -22
Get sequence
Mature sequence

Cel-Mir-255_3p

mirBase accessionMIMAT0004216
Sequence
37- AAACUGAAGAGAUUUUUUACAG -59
Get sequence
Proposed targets microrna.org: MIMAT0004216
TargetScanWorm: cel-miR-255