MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-86

Family name MIR-86 (all species)
Seed AAGUGAA
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-86
Paralogues
Orthologues Asu-Mir-86  Cel-Mir-86 
Node of Origin (locus) Chromadorea
Node of Origin (family) Chromadorea
Genome context
(CB4)
III: 6376887-6376952 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUCUUCAACAAACCGAGUCAAUGCCGUUUAAGUGAAUGCUUUGCCACAGUCUUCGAUCAUGUCACAUGAAGCCUGGGCUUAGAUUCACUUAGGCCGGCGUUCCUUGACUCAGCCUUUUUUUCUU
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Structure
        10        20           30        40        50        60   
UCCUCUUCAACAAACCGAGUC--      -|           G  UU   A   U UUCGAUCAU 
                       AAUGCC GUUUAAGUGAAU CU  GCC CAG C         \
                       UUGCGG CGGAUUCACUUA GA  CGG GUC G         G
UUCUUUUUUUCCGACUCAGUUCC      C^           -  UU   -   C AAGUACACU 
    120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Mature sequence

Cbr-Mir-86_5p

mirBase accessionMIMAT0000491
Sequence
0- UAAGUGAAUGCUUUGCCACAGUC -23
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Star sequence

Cbr-Mir-86_3p*

mirBase accessionNone
Sequence
44- CUGGGCUUAGAUUCACUUAGGC -66
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