| MirGeneDB ID | Cbr-Mir-86 |
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| Family name |
MIR-86 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-86
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| Paralogues |
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| Orthologues |
Asu-Mir-86
Cel-Mir-86
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| Node of Origin (locus) |
Chromadorea
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| Node of Origin (family) |
Chromadorea
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Genome context
(CB4) |
III: 6376887-6376952 [-]
Ensembl
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| Seed |
AAGUGAA |
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Precursor
(pre-Mir +30nt flank) |
UCCUCUUCAACAAACCGAGUCAAUGCCGUUUAAGUGAAUGCUUUGCCACAGUCUUCGAUCAUGUCACAUGAAGCCUGGGCUUAGAUUCACUUAGGCCGGCGUUCCUUGACUCAGCCUUUUUUUCUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UCCUCUUCAACAAACCGAGUC-- -| G UU A U UUCGAUCAU
AAUGCC GUUUAAGUGAAU CU GCC CAG C \
UUGCGG CGGAUUCACUUA GA CGG GUC G G
UUCUUUUUUUCCGACUCAGUUCC C^ - UU - C AAGUACACU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Mature sequence |
Cbr-Mir-86_5p |
| mirBase accession | MIMAT0000491 |
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| Sequence |
0- UAAGUGAAUGCUUUGCCACAGUC -23
Get sequence
|
|---|
| Star sequence |
Cbr-Mir-86_3p* |
| mirBase accession | None |
|---|
| Sequence |
44- CUGGGCUUAGAUUCACUUAGGC -66
Get sequence
|
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