| MirGeneDB ID | Cbr-Mir-787 |
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| Family name |
MIR-787 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-787
|
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| Paralogues |
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| Orthologues |
Cel-Mir-787
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| Node of Origin (locus) |
Caenorhabditis
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| Node of Origin (family) |
Caenorhabditis
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Genome context
(CB4) |
X: 5308354-5308415 [-]
Ensembl
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| Seed |
AAGCUCG |
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Precursor
(pre-Mir +30nt flank) |
UUCUCUGAAAAUCCCCUCAAAAUGGAGAAGAAGGAAACUAGACAAUCUUACAUAGCUCAAAAUAAUCUGUAAGCUCGUCUUAGUUUUCCUCUCCUCUCUAGGGAAUAUUGAUUGGUAAGAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCUCUGAAAAUCCCCUCAAAA -- A -| AAU UAGCUCA
UGGAGA AGA GGAAACU AGAC CUUACA \
AUCUCU UCU CUUUUGA UCUG GAAUGU A
UUAGAAUGGUUAGUUAUAAGGG CC C U^ CUC CUAAUAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-787_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAGGAAACUAGACAAUCUUACA -22
Get sequence
|
|---|
| Mature sequence |
Cbr-Mir-787_3p |
| mirBase accession | MIMAT0004288 |
|---|
| Sequence |
39- UAAGCUCGUCUUAGUUUUCCUCU -62
Get sequence
|
|---|
