MirGeneDB 3.0

MirGeneDB ID

Cbr-Mir-70

Family name MIR-70 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-70
Paralogues
Orthologues Cel-Mir-70 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)
V: 12360178-12360240 [-] Ensembl
Seed AAUACGU
Precursor
(pre-Mir +30nt flank)
AGUUAUUAUUUUCAAAACGGAUGUAUCUCUAGGAACAGCCAUCAUGUAAGACAUUUCUAACUGAAAGAUGUAAUACGUGAUUGGUGUUCCCAGAGUUUACCGUUUCCUUCUUUUAUUUUUCCA
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Structure
        10            20        30        40         50        60 
AGUUAUUAUUUUCAAAA----|  A  UAU    A      G   -       AG   UUUCUAA 
                     CGG UG   CUCU GGAACA CCA UCAUGUA  ACA       \
                     GCC AU   GAGA CCUUGU GGU AGUGCAU  UGU       C
ACCUUUUUAUUUUCUUCCUUU^  -  UU-    C      -   U       AA   AGAAAGU 
 120       110       100          90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-70_5p*

mirBase accessionNone
Sequence
0- AGGAACAGCCAUCAUGUAAGACA -23
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Mature sequence

Cbr-Mir-70_3p

mirBase accessionMIMAT0001300
Sequence
40- UAAUACGUGAUUGGUGUUCCCAG -63
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