MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-62

Family name MIR-62 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-62
Paralogues
Orthologues Cel-Mir-62 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)		 X: 14298386-14298443 [-] Ensembl
Seed GAUAUGU
Precursor
(pre-Mir +30nt flank)		 
CAUCGACCCUUGCAACUCGGCUAUUAUAAGGUGGGUUAGAUCCCAUAUCCUUCCGCUUGAUGGAAAUGAUAUGUAAUCUAGCUUACAGGUCUCUCAACAUCUCCAAGACGGUGCUACU
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Structure
        10        20        30          40        50        
CAUCGACCCUUGCAACUCGGCUAUUAUAAG--|          CC      CUUCCGCU 
                                GUGGGUUAGAU  CAUAUC        U
                                CAUUCGAUCUA  GUAUAG        G
UCAUCGUGGCAGAACCUCUACAACUCUCUGGA^          AU      UAAAGGUA 
      110       100        90        80        70        60
Deep sequencing
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CommentMir-62 is a conserved mirtron cut at both ends by the spliceosome.
3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-62_5p*
mirBase accessionNone
Sequence 
0- GUGGGUUAGAUCCCAUAUCCUU -22
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Mature sequence

Cbr-Mir-62_3p
mirBase accessionMIMAT0001309
Sequence 
36- UGAUAUGUAAUCUAGCUUACAG -58
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