MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-7861

Family name MIR-7861 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-7861
Paralogues
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037340.1: 13066646-13066703 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7861-v1)		 Mir-7861-v2 NC_037340.1: 13066645-13066704 [-] UCSC Ensembl
Mir-7861-v1 NC_037340.1: 13066646-13066703 [-] UCSC Ensembl
Variant

Bta-Mir-7861-v1
Seed CACUCAG
Precursor
(pre-Mir +30nt flank)		 
AGAGUCAGACGCGACUGAGCAUGCACACACACACUCAGAUAAAGUAGGCACUUUUUGGUUCUUGAAAUGCUACCUAGUCUGAGUGAGUGAGUGUGUGUACGCAUGGCAUCGUGCUUCC
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Structure
        10          20        30        40        50         
AGAGUCAGACGCGACUGA--|       A   A         AAA    G  C  UUUGG 
                    GCAUGCAC CAC CACUCAGAU   GUAG CA UU     \
                    UGUGUGUG GUG GUGAGUCUG   CAUC GU AA     U
CCUUCGUGCUACGGUACGCA^       A   A         AUC    -  A  GUUCU 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-7861-v1_5p
mirBase accessionNone
Sequence 
0- ACACUCAGAUAAAGUAGGCACUU -23
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Star sequence

Bta-Mir-7861-v1_3p*
mirBase accessionMIMAT0030441
Sequence 
36- AUGCUACCUAGUCUGAGUGAGU -58
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Proposed targets TargetScanVert: bta-miR-7861
Variant

Bta-Mir-7861-v2
Seed ACACUCA
Precursor
(pre-Mir +30nt flank)		 
AAGAGUCAGACGCGACUGAGCAUGCACACACACACUCAGAUAAAGUAGGCACUUUUUGGUUCUUGAAAUGCUACCUAGUCUGAGUGAGUGAGUGUGUGUACGCAUGGCAUCGUGCUUCCC
Get precursor sequence
Structure
        10          20        30        40        50          
AAGAGUCAGACGCGACU--|A        A   A         AAA    G  CUUUUUGG 
                   G GCAUGCAC CAC CACUCAGAU   GUAG CA        \
                   C UGUGUGUG GUG GUGAGUCUG   CAUC GU        U
CCCUUCGUGCUACGGUACG^A        A   A         AUC    -  AAAGUUCU 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-7861-v2_5p
mirBase accessionNone
Sequence 
0- CACACUCAGAUAAAGUAGGCACU -23
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Star sequence

Bta-Mir-7861-v2_3p* (predicted)
mirBase accessionMIMAT0030441
Sequence 
38- UGCUACCUAGUCUGAGUGAGUG -60
Get sequence
Proposed targets TargetScanVert: bta-miR-7861