| MirGeneDB ID | Bla-Mir-4873 |
|---|
| Family name |
MIR-4873 (all species) |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bfl-Mir-4873
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(BraLan2) |
Sc0000015: 1919119-1919176 [-]
Ensembl
|
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| Seed |
GUUCCCA |
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Precursor
(pre-Mir +30nt flank) |
CAGGGAGAGAGGACGCUCGGCACUGGGGUGUGUUCCCACCUUCUGAUGUUGUUUGGUCACGUGAUACAACAUCCCAGGGCGGGGCACAUCCCAGGCUGCCAUGGGAACAACCGAACAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGGGAGAGAGGACGCUC --| U A CU UUGGUC
GGCA CUGGGGUGUGU CCC CCUU GAUGUUGU \
CCGU GACCCUACACG GGG GGGA CUACAACA A
GACAAGCCAACAAGGGUA CG^ - C CC UAGUGC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Bla-Mir-4873_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUCCCACCUUCUGAUGUUGUU -23
Get sequence
|
|---|
| Star sequence |
Bla-Mir-4873_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CAACAUCCCAGGGCGGGGCACA -58
Get sequence
|
|---|
