| MirGeneDB ID | Bfl-Mir-4873 |
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| Family name |
MIR-4873 (all species) |
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| Seed |
GUUCCCA |
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| Species |
Florida lancelet (Branchiostoma floridae) |
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| MiRBase ID |
bfl-mir-4873
|
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| Paralogues |
|
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| Orthologues |
Bla-Mir-4873
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic) |
NC_049988.1: 7250319-7250376 [-]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
GUGAUGACAGGAAUGCUCGGCACUGGGGUGUGUUCCCACCUUCUGAUGUUGUUUAGUCAUGUGAUACAACAUCCCAGGGCGGGGCACAUCCCAGGCUGCCAUGGGAACAACCGAACAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGAUGACAGGAAUGCUC --| U A CU UUAGUC
GGCA CUGGGGUGUGU CCC CCUU GAUGUUGU \
CCGU GACCCUACACG GGG GGGA CUACAACA A
GACAAGCCAACAAGGGUA CG^ - C CC UAGUGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Bfl-Mir-4873_5p |
| mirBase accession | MIMAT0020452 |
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| Sequence |
0- UGUUCCCACCUUCUGAUGUUGUU -23
Get sequence
|
|---|
| Star sequence |
Bfl-Mir-4873_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CAACAUCCCAGGGCGGGGCACA -58
Get sequence
|
|---|
