MirGeneDB 2.1

MirGeneDB ID

Bla-Mir-4861

Family name MIR-4861 (all species)
Seed UUUACGU
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Bfl-Mir-4861 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)
Sc0000005: 3994287-3994346 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGGAACAGUUGGAUCUGCUCACAGACGAUGAGCCAAUGCGGCAUGUAAAAGGCUGAACUGUUCUGUGUCUUUACGUGCCACAUUGUCUCCUUGUCUGCUGUGCUUAAGCAUCGAAGGACU
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Structure
        10         20         30        40        50          
CGGAACAGUUGGAUCUG- U  -|      U   C     C          A   UGAACU 
                  C CA CAGACGA GAG CAAUG GGCAUGUAAA GGC      \
                  G GU GUCUGUU CUC GUUAC CCGUGCAUUU CUG      G
UCAGGAAGCUACGAAUUC U  C^      C   U     A          -   UGUCUU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Bla-Mir-4861_5p*

mirBase accessionNone
Sequence
0- AGCCAAUGCGGCAUGUAAAAGGC -23
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Mature sequence

Bla-Mir-4861_3p

mirBase accessionNone
Sequence
38- CUUUACGUGCCACAUUGUCUCC -60
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