| MirGeneDB ID | Bfl-Mir-4861 |
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| Family name |
MIR-4861 (all species) |
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| Seed |
UUUACGU |
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| Species |
Florida lancelet (Branchiostoma floridae) |
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| MiRBase ID |
bfl-mir-4861
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| Paralogues |
|
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| Orthologues |
Bla-Mir-4861
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic) |
NC_049984.1: 8835182-8835242 [+]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
CGGAAAAGGUGGAUCUGCUCACAGACGAUGAGCCAAUGCGGCAUGUAAAAGGCUAAAAACGUUCUGUGUCUUUACGUGCCACAUUGUCUCCUUGUCUGCUGUGCUUAAGCAUCGAUGGAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CGGAAAAGGUGGAUCUG- U -| U C C A UAAAAA
C CA CAGACGA GAG CAAUG GGCAUGUAAA GGC C
G GU GUCUGUU CUC GUUAC CCGUGCAUUU CUG G
UAAGGUAGCUACGAAUUC U C^ C U A - UGUCUU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Bfl-Mir-4861_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCCAAUGCGGCAUGUAAAAGGC -23
Get sequence
|
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| Mature sequence |
Bfl-Mir-4861_3p |
| mirBase accession | MIMAT0020090 |
|---|
| Sequence |
39- CUUUACGUGCCACAUUGUCUCC -61
Get sequence
|
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