| MirGeneDB ID | Bla-Mir-2071 |
|---|
| Family name |
MIR-2071 (all species) |
|---|
| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bfl-Mir-2071
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(BraLan2) |
Sc0000288: 188827-188888 [+]
Ensembl
|
|---|
| Seed |
UUGUUAC |
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Precursor
(pre-Mir +30nt flank) |
CCGUCCCGUUCCGUUAUCCGCGGGUUGAAUAUGCGGUGCGGUGGUAGCAACCGUCCCGACGUAAAGUCGAUUGUUACACCGCGCCGCAAAAGUUGACCUGACGGCCUCAAACAACUUACAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCGUCCCGUUCCGUUAU- - UG AUA-| G C UCCCGA
CCG CGGGU A UGCGGUGCGGUG UAGCAA CG C
GGC GUCCA U ACGCCGCGCCAC AUUGUU GC G
CGACAUUCAACAAACUCC A GU GAAA^ - A UGAAAU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Bla-Mir-2071_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUGCGGUGCGGUGGUAGCAACCG -23
Get sequence
|
|---|
| Mature sequence |
Bla-Mir-2071_3p |
| mirBase accession | None |
|---|
| Sequence |
39- AUUGUUACACCGCGCCGCAAAAG -62
Get sequence
|
|---|
