| MirGeneDB ID | Bla-Mir-2068 |
|---|
| Family name |
MIR-2068 (all species) |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bfl-Mir-2068
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(BraLan2) |
Sc0000076: 651438-651494 [-]
Ensembl
|
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| Seed |
UUCCUAU |
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Precursor
(pre-Mir +30nt flank) |
UUGGAUAUCCGAGAUUGCUGGUUUGUUCUUCUUCCUAUGCACAUCUGUCCUUGUAAGCUGCAAGAGGACAUGUGUGCAUAGGGAUGAGAUCAGCCUGCCAAGUCAGCAUCAGUGAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUGGAUAUCCGAGAUUGCU ---| U C C GUAAG
GGU UUG UCUU UUCCUAUGCACAU UGUCCUU \
CCG GAC AGAG AGGGAUACGUGUG ACAGGAG C
GGAGUGACUACGACUGAA- UCC^ U U U AACGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Bla-Mir-2068_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CUUCCUAUGCACAUCUGUCCUU -22
Get sequence
|
|---|
| Star sequence |
Bla-Mir-2068_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- GGACAUGUGUGCAUAGGGAUGA -57
Get sequence
|
|---|
