| MirGeneDB ID | Bla-Mir-2062 |
|---|
| Family name |
MIR-2062 (all species) |
|---|
| Seed |
GCAACAA |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
|---|
| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bfl-Mir-2062
|
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| Node of Origin (locus) |
Branchiostoma
|
|---|
| Node of Origin (family) |
Branchiostoma
|
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Genome context
(BraLan2) |
Sc0000099: 755629-755687 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGCUGUGCACAUUCACGGGCGGCCUGCUCUGCAACAAUAUUUCAUCAGUGGUGAACUGCAAAGCCUACUGGUGAAAUGUAGUUGCGUAGGAGGCCGGCCACUGUCUACAGGGAGAAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAGCUGUGCACAUUCAC--| G G C A UGAACU
GG CGGCCU CU UGCAAC AUAUUUCAUCAGUGG \
CC GCCGGA GA GCGUUG UGUAAAGUGGUCAUC G
GGAAGAGGGACAUCUGUCA^ G G U A CGAAAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Bla-Mir-2062_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGCAACAAUAUUUCAUCAGUGG -22
Get sequence
|
|---|
| Star sequence |
Bla-Mir-2062_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACUGGUGAAAUGUAGUUGCGUA -59
Get sequence
|
|---|
