MirGeneDB 2.1

MirGeneDB ID

Bla-Mir-129-P7

Family name MIR-129 (all species)
Seed CUUUUUG
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-129-P8a  Bla-Mir-129-P8b 
Orthologues Bfl-Mir-129-P7 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Chordata
Genome context
(BraLan2)
Sc0000180: 389285-389344 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGACUGUGUACACCACUCGGCGUGCCCUGUCCUUUUUGUGGUUUGGGGCUUUUGAGAUCUCGACAGAAAAGCCCUUACCUCAAAAGGGAUAGGGUUCUGCUGCAUGUAGCGACAUAUACA
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Structure
        10         20         30        40        50          
CGACUGUGUACACCACU-     U-|              U   UU         GAGAUC 
                  CGGCG  GCCCUGUCCUUUUUG GGU  GGGGCUUUU      \
                  GUCGU  UGGGAUAGGGAAAAC CCA  UCCCGAAAA      U
ACAUAUACAGCGAUGUAC     CU^              U   U-         GACAGC 
.       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
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Mature sequence

Bla-Mir-129-P7_5p

mirBase accessionNone
Sequence
0- CCUUUUUGUGGUUUGGGGCUUUU -23
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Star sequence

Bla-Mir-129-P7_3p* (predicted)

mirBase accessionNone
Sequence
38- AAGCCCUUACCUCAAAAGGGAU -60
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