MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-190-P27

Family name MIR-190 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-190-P26 
Orthologues Aae-Mir-190  Aga-Mir-190  Agr-Mir-190  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bko-Mir-190  Bla-Mir-190  Bpl-Mir-190  Cbr-Mir-190  Cel-Mir-190  Cte-Mir-190  Dan-Mir-190  Dlo-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dpu-Mir-190  Dsi-Mir-190  Dya-Mir-190  Eba-Mir-190  Egr-Mir-190  Esc-Mir-190  Gpa-Mir-190  Gsa-Mir-190  Hme-Mir-190  Hmi-Mir-190  Hru-Mir-190  Isc-Mir-190  Mgi-Mir-190  Mom-Mir-190  Npo-Mir-190  Obi-Mir-190  Ofu-Mir-190  Ovu-Mir-190  Pau-Mir-190  Pca-Mir-190  Pdu-Mir-190  Pfl-Mir-190  Pmi-Mir-190  Pve-Mir-190  Rph-Mir-190  Sko-Mir-190  Sma-Mir-190  Snu-Mir-190  Tca-Mir-190  Tur-Mir-190  War-Mir-190  Xbo-Mir-190 
Node of Origin (locus) A. vaga
Node of Origin (family) Bilateria
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075494.1: 7991333-7991392 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-190-P27)		 Mir-1993-P11 CP075494.1: 7959653-7959714 [-] Ensembl
Mir-190-P27 CP075494.1: 7991333-7991392 [-] Ensembl
Seed GAUAUGU
Precursor
(pre-Mir +30nt flank)		 
UUGAUAGGGAUGAAUACAGAUUUGUUGUCAUGAUAUGUUUGAUAUUUGGUUGUUUGAUCUAUAAUUCAACCGAGUAUUGCUCAUAUCUGCACAAUUUAUCUUCAUCAACAAAGACAAUUG
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Structure
        10          20         30        40        50         
UUGAUAGGGAUGAAUAC--    UU     -| U      UU             UUUGAU 
                   AGAU  GUUGU CA GAUAUG  UGAUAUUUGGUUG      C
                   UCUA  UAACA GU CUAUAC  GUUAUGAGCCAAC      U
GUUAACAGAAACAACUACU    UU     C^ -      UC             UUAAUA 
.       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Mature sequence

Ava-Mir-190-P27_5p
mirBase accessionNone
Sequence 
0- UGAUAUGUUUGAUAUUUGGUUG -22
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Star sequence

Ava-Mir-190-P27_3p*
mirBase accessionNone
Sequence 
38- ACCGAGUAUUGCUCAUAUCUGC -60
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