| MirGeneDB ID | Asp-Mir-2030 |
|---|
| Family name |
MIR-2030 (all species) |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Adi-Mir-2030
Hvu-Mir-2030
Nve-Mir-2030
|
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| Node of Origin (locus) |
Cnidaria
|
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| Node of Origin (family) |
Cnidaria
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001210.1: 66459574-66459625 [-]
Ensembl
|
|---|
| Seed |
AGCAUAA |
|---|
Precursor
(pre-Mir +30nt flank) |
CAGAGUGGAGAAUCUUUUAGUGUAACCAAAUAGCAUAACAUUGUAAGAGAUUUUUAAAACCUCUUUACCGUGUUAUGCUGUCUGGAAAUGCUAUAUAAACCAAAGGGACACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGAGUGGAGAAUCUUU-- AA A U -| AUUUU
UAGUGU CCA AUAGCAUAACAU GU AAGAG \
AUCGUA GGU UGUCGUAUUGUG CA UUCUC U
ACACAGGGAAACCAAAUAU AA C C U^ CAAAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Asp-Mir-2030_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAGCAUAACAUUGUAAGAGAUU -22
Get sequence
|
|---|
| Star sequence |
Asp-Mir-2030_3p* |
| mirBase accession | None |
|---|
| Sequence |
29- CCUCUUUACCGUGUUAUGCUGUC -52
Get sequence
|
|---|
