MirGeneDB ID | Aae-Mir-11899-P1 |
Family name |
MIR-11899 (all species) |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-11899-1
|
Paralogues |
Aae-Mir-11899-P2
|
Orthologues |
|
Node of Origin (locus) |
A. aegypti
|
Node of Origin (family) |
A. aegypti
|
Genome context (Aaeg_L3) |
supercont1.548: 126322-126384 [+]
Ensembl
|
Seed |
AUGUAUG |
Precursor (pre-Mir +30nt flank) |
CCCUUAUGUAGGCCAUUUUUUCUACUGUUCCAUGUAUGAUUUCGGUCAUGUAUGCAGUUGAAAAUAAUUAUAUGACCGAUUUAAUAUAUGGCUCAGUGGUUAUGAAAAAUCAUCAAACCCAAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCCUUAUGUAGGCCAUUUUUU---| UU GAUU UGCAGUU
CUACUG CCAUGUAU UCGGUCAUGUA G
GGUGAC GGUAUAUA AGCCAGUAUAU A
AAACCCAAACUACUAAAAAGUAUU^ UC AUUU UAAUAAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Aae-Mir-11899-P1_5p |
mirBase accession | None |
Sequence |
0- CAUGUAUGAUUUCGGUCAUGUA -22
Get sequence
|
Star sequence |
Aae-Mir-11899-P1_3p* |
mirBase accession | MIMAT0045998 |
Sequence |
40- UAUGACCGAUUUAAUAUAUGGCU -63
Get sequence
|