| MirGeneDB ID | Aae-Mir-11899-P1 |
|---|
| Family name |
MIR-11899 (all species) |
|---|
| Seed |
AUGUAUG |
|---|
| Species |
Yellow fever mosquito (Aedes aegypti) |
|---|
| MiRBase ID |
aae-mir-11899-1
|
|---|
| Paralogues |
Aae-Mir-11899-P2
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
A. aegypti
|
|---|
| Node of Origin (family) |
A. aegypti
|
|---|
Genome context
(Aaeg_L3) |
supercont1.548: 126322-126384 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCCUUAUGUAGGCCAUUUUUUCUACUGUUCCAUGUAUGAUUUCGGUCAUGUAUGCAGUUGAAAAUAAUUAUAUGACCGAUUUAAUAUAUGGCUCAGUGGUUAUGAAAAAUCAUCAAACCCAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCCUUAUGUAGGCCAUUUUUU---| UU GAUU UGCAGUU
CUACUG CCAUGUAU UCGGUCAUGUA G
GGUGAC GGUAUAUA AGCCAGUAUAU A
AAACCCAAACUACUAAAAAGUAUU^ UC AUUU UAAUAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Aae-Mir-11899-P1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CAUGUAUGAUUUCGGUCAUGUA -22
Get sequence
|
|---|
| Star sequence |
Aae-Mir-11899-P1_3p* |
| mirBase accession | MIMAT0045998 |
|---|
| Sequence |
40- UAUGACCGAUUUAAUAUAUGGCU -63
Get sequence
|
|---|
