MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-11893-P2

Family name MIR-11893 (all species)
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-11893-1
Paralogues Aae-Mir-11893-P1 
Orthologues
Node of Origin (locus) A. aegypti
Node of Origin (family) A. aegypti
Genome context
(Aaeg_L3)		 supercont1.154: 420378-420436 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-11893-P2)		 Mir-11893-P1 supercont1.154: 394987-395045 [+] Ensembl
Mir-11893-P2 supercont1.154: 420378-420436 [+] Ensembl
Seed UCCUGAC
Precursor
(pre-Mir +30nt flank)		 
UGCAUUAUGGACAUCCGCAGUUCAAGGAUGGUAAGUAGAUAAAUCAGAAAGACGUUUAUAUCGUUUCUUCCUGACUUAUACGCUUACCUCACAGGUUGGUACUGGAUCGAUCCGAACUU
Get precursor sequence
Structure
        10        20           30        40        50         
UGCAUUAUGGACAUCCGCAGUUCAAG---| U       AG    A    A    CGUUUA 
                             GA GGUAAGU  AUAA UCAG AAGA      \
                             CU CCAUUCG  UAUU AGUC UUCU      U
UUCAAGCCUAGCUAGGUCAUGGUUGGACA^ -       CA    C    C    UUGCUA 
       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Ge Ge So So To To To
Star sequence

Aae-Mir-11893-P2_5p*
mirBase accessionNone
Sequence 
0- GUAAGUAGAUAAAUCAGAAAGA -22
Get sequence
Mature sequence

Aae-Mir-11893-P2_3p
mirBase accessionMIMAT0045989
Sequence 
37- UUCCUGACUUAUACGCUUACCU -59
Get sequence