MirGeneDB 3.0

15 microRNA genes with node of origin S. mansoni
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Sma-Mir-2-o130 sma-mir-2a MIR-2 CACAGCC MIMAT0025029 MIMAT0025030 OU426849.1 4544063 4544117 + S. mansoni Protostomia No 1
Sma-Mir-2-o131 sma-mir-2b MIR-2 AUCACAG MIMAT0025031 MIMAT0025032 OU426849.1 4544155 4544212 + S. mansoni Protostomia No 1
Sma-Mir-2-o132 sma-mir-2e MIR-2 AUCACAG MIMAT0025036 MIMAT0025037 OU426849.1 4544251 4544316 + S. mansoni Protostomia Unknown 1 1
Sma-Mir-2-o133 sma-mir-2f MIR-2 GUGUUGA None MIMAT0033691 HE601628.3 9679871 9679943 + S. mansoni Protostomia Unknown 1
Sma-Mir-2-o134 sma-mir-2d MIR-2 UCAUCCU MIMAT0032135 MIMAT0025035 HE601628.3 9679986 9680055 + S. mansoni Protostomia Unknown 1
Sma-Mir-2-o135 sma-mir-2d MIR-2 AUCACAG MIMAT0032135 MIMAT0025035 HE601628.3 9680098 9680158 + S. mansoni Protostomia Unknown 1
Sma-Mir-10-P3o3 sma-mir-125c MIR-10 CCCUGAG MIMAT0033510 MIMAT0033511 HE601624.3 52771706 52771788 + S. mansoni Eumetazoa Unknown
Sma-Mir-10-P3o4 sma-mir-125a MIR-10 CCCUGAG MIMAT0010183 MIMAT0032105 HE601630.3 15003808 15003886 - S. mansoni Eumetazoa No 1
Sma-Mir-10-P3o5 sma-mir-125b MIR-10 CCCUGAG MIMAT0010184 None HE601624.3 86578326 86578400 - S. mansoni Eumetazoa No
Sma-Mir-36-o33 sma-mir-8457 MIR-36 GGGUGGA MIMAT0033626 MIMAT0033627 HE601630.3 16879209 16879307 - S. mansoni Protostomia No
Sma-Mir-36-o34 sma-mir-36a MIR-36 CACCGGG MIMAT0032137 MIMAT0025041 HE601624.3 72169272 72169343 - S. mansoni Protostomia No
Sma-Mir-36-o35 sma-mir-36b MIR-36 CACCGGG MIMAT0033514 MIMAT0033515 HE601624.3 72204878 72204977 - S. mansoni Protostomia No 1
Sma-Mir-92-o132 None MIR-92 AUUGCAC None None HE601624.3 60358613 60358707 + S. mansoni Bilateria No 1 1
Sma-Mir-92-o133 sma-mir-3479 MIR-92 AUUGCAC MIMAT0025039 MIMAT0025039 HE601627.3 8894058 8894113 - S. mansoni Bilateria No 1 1
Sma-Novel-1 None SMA-NOVEL-1 UCACAGA None None HE601624.3 28064339 28064437 + S. mansoni S. mansoni No 1

(red - mature/co-mature, blue - star)

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