MirGeneDB 3.0

15 microRNA genes with node of origin S. mansoni
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Sma-Mir-2-o130 sma-mir-2a MIR-2 CACAGCC MIMAT0025029 MIMAT0025030 OU426849.1 4544063 4544117 + S. mansoni Protostomia No 1
Sma-Mir-2-o131 sma-mir-2b MIR-2 AUCACAG MIMAT0025031 MIMAT0025032 OU426849.1 4544155 4544212 + S. mansoni Protostomia No 1
Sma-Mir-2-o132 sma-mir-2e MIR-2 AUCACAG MIMAT0025036 MIMAT0025037 OU426849.1 4544251 4544316 + S. mansoni Protostomia Unknown 1 1
Sma-Mir-2-o133 sma-mir-2f MIR-2 GUGUUGA None MIMAT0033691 HE601628.3 9679871 9679943 + S. mansoni Protostomia Unknown 1
Sma-Mir-2-o134 sma-mir-2d MIR-2 UCAUCCU MIMAT0032135 MIMAT0025035 HE601628.3 9679986 9680055 + S. mansoni Protostomia Unknown 1
Sma-Mir-2-o135 sma-mir-2d MIR-2 AUCACAG MIMAT0032135 MIMAT0025035 HE601628.3 9680098 9680158 + S. mansoni Protostomia Unknown 1
Sma-Mir-10-P3o3 sma-mir-125c MIR-10 CCCUGAG MIMAT0033510 MIMAT0033511 HE601624.3 52771706 52771788 + S. mansoni Eumetazoa Unknown
Sma-Mir-10-P3o4 sma-mir-125a MIR-10 CCCUGAG MIMAT0010183 MIMAT0032105 HE601630.3 15003808 15003886 - S. mansoni Eumetazoa No 1
Sma-Mir-10-P3o5 sma-mir-125b MIR-10 CCCUGAG MIMAT0010184 None HE601624.3 86578326 86578400 - S. mansoni Eumetazoa No
Sma-Mir-36-o33 sma-mir-8457 MIR-36 GGGUGGA MIMAT0033626 MIMAT0033627 HE601630.3 16879209 16879307 - S. mansoni Protostomia No
Sma-Mir-36-o34 sma-mir-36a MIR-36 CACCGGG MIMAT0032137 MIMAT0025041 HE601624.3 72169272 72169343 - S. mansoni Protostomia No
Sma-Mir-36-o35 sma-mir-36b MIR-36 CACCGGG MIMAT0033514 MIMAT0033515 HE601624.3 72204878 72204977 - S. mansoni Protostomia No 1
Sma-Mir-92-o132 None MIR-92 AUUGCAC None None HE601624.3 60358613 60358707 + S. mansoni Bilateria No 1 1
Sma-Mir-92-o133 sma-mir-3479 MIR-92 AUUGCAC MIMAT0025039 MIMAT0025039 HE601627.3 8894058 8894113 - S. mansoni Bilateria No 1 1
Sma-Novel-1 None SMA-NOVEL-1 UCACAGA None None HE601624.3 28064339 28064437 + S. mansoni S. mansoni No 1

(red - mature/co-mature, blue - star)

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