MirGeneDB 3.0

4 microRNA genes with seed AGGCCAU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pca-Novel-1 None PCA-NOVEL-1 AGGCCAU None None KQ714938.1 413106 413164 + P. caudatus P. caudatus No 1
Bko-Mir-12601-P1b None MIR-12601 AGGCCAU None None PJRA01000313.1 3156736 3156798 + B. koreanus Brachionus No 1
Bko-Mir-12601-P1a None MIR-12601 AGGCCAU None None PJRA01000274.1 804124 804186 - B. koreanus Brachionus No 1
Bpl-Mir-12601 None MIR-12601 AGGCCAU None None QEOQ01000590.1 664374 664431 - Brachionus Brachionus Unknown 1

(red - mature/co-mature, blue - star)

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