MirGeneDB ID | Xbo-Mir-252-P1i |
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Family name | MIR-252 (all species) |
Seed | UAAGUAG |
Species | Xenoturbella (Xenoturbella bocki) |
MiRBase ID | |
Paralogues | Xbo-Mir-252-P1g Xbo-Mir-252-P1h Xbo-Mir-252-P2g Xbo-Mir-252-P2h |
Orthologues | Asu-Mir-252-P1 Bfl-Mir-252-P1-v1 Bfl-Mir-252-P1-v2 Bge-Mir-252-P1 Bla-Mir-252-P1-v1 Bla-Mir-252-P1-v2 Cbr-Mir-252-P1 Cel-Mir-252-P1 Cgi-Mir-252-P1 Csc-Mir-252-P1 Cte-Mir-252-P1 Dma-Mir-252-P1-v1 Dma-Mir-252-P1-v2 Dpu-Mir-252-P1 Esc-Mir-252-P1 Hme-Mir-252-P1 Isc-Mir-252-P1 Lan-Mir-252-P1 Lgi-Mir-252-P1 Npo-Mir-252-P1 Obi-Mir-252-P1 Ovu-Mir-252-P1 Pfl-Mir-252-P1 Pmi-Mir-252-P1 Sko-Mir-252-P1 Spu-Mir-252-P1 Tca-Mir-252-P1 |
Node of Origin (locus) | X. bocki |
Node of Origin (family) | Bilateria |
Genome context (Xbocki_plus) |
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Precursor (pre-Mir +30nt flank) | CUAAGUAGUAGUGCCGUAGGUAAUCUGAUUUGAGACUUUACCUGCACACUUCUGCUUAUAGet precursor sequence |
Structure | 10 20 C- U CC --| GA UAAGUAG AGUG GUAGGUAA UCU U AUUCGUC UCAC CGUCCAUU AGA U AU U A- UC^ GU . 50 40 30 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Mature sequence | Xbo-Mir-252-P1i_5p |
mirBase accession | None |
Sequence |
0- CUAAGUAGUAGUGCCGUAGGUAA -23
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|
Star sequence | Xbo-Mir-252-P1i_3p* (predicted) |
mirBase accession | None |
Sequence |
39- ACCUGCACACUUCUGCUUAUA -60
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