MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-10-P2d

Family name MIR-10 (all species)
Seed ACCCGUA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-100
Paralogues Hsa-Mir-10-P1b-v1  Hsa-Mir-10-P1b-v2  Hsa-Mir-10-P1c-v1  Hsa-Mir-10-P1c-v2  Hsa-Mir-10-P2b  Hsa-Mir-10-P2c  Hsa-Mir-10-P3b  Hsa-Mir-10-P3c  Hsa-Mir-10-P3d 
Orthologues Aae-Mir-10-P2  Aca-Mir-10-P2d  Ami-Mir-10-P2d  Bfl-Mir-10-P2-v1  Bfl-Mir-10-P2-v2  Bge-Mir-10-P2  Bla-Mir-10-P2-v1  Bla-Mir-10-P2-v2  Bpl-Mir-10-P2  Bta-Mir-10-P2d  Cbr-Mir-10-P2  Cel-Mir-10-P2  Cfa-Mir-10-P2d  Cgi-Mir-10-P2  Cin-Mir-10-P2  Cli-Mir-10-P2d  Cmi-Mir-10-P2d  Cpi-Mir-10-P2d  Cpo-Mir-10-P2d  Cte-Mir-10-P2  Dan-Mir-10-P2  Dma-Mir-10-P2  Dme-Mir-10-P2  Dmo-Mir-10-P2  Dno-Mir-10-P2d  Dpu-Mir-10-P2  Dre-Mir-10-P2d1  Dre-Mir-10-P2d2  Dsi-Mir-10-P2  Dya-Mir-10-P2  Ete-Mir-10-P2d  Gga-Mir-10-P2d  Gja-Mir-10-P2d  Gmo-Mir-10-P2d1  Gmo-Mir-10-P2d2  Isc-Mir-10-P2  Lan-Mir-10-P2  Lch-Mir-10-P2d  Lgi-Mir-10-P2  Loc-Mir-10-P2d  Mal-Mir-10-P2d1  Mal-Mir-10-P2d2  Mdo-Mir-10-P2d  Mml-Mir-10-P2d  Mmu-Mir-10-P2d  Mun-Mir-10-P2d  Npo-Mir-10-P2  Nve-Mir-10  Oan-Mir-10-P2d  Obi-Mir-10-P2  Ocu-Mir-10-P2d  Ovu-Mir-10-P2  Pbv-Mir-10-P2d  Pfl-Mir-10-P2  Pmi-Mir-10-P2  Rno-Mir-10-P2d  Sha-Mir-10-P2d  Sko-Mir-10-P2  Spt-Mir-10-P2d  Sto-Mir-10-P2d  Tca-Mir-10-P2  Tgu-Mir-10-P2d  Tni-Mir-10-P2d1  Tni-Mir-10-P2d2  Xbo-Mir-10-P2  Xbo-Mir-10-P2-as 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Eumetazoa
Genome context
(hg38)
chr11: 122152240-122152296 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P2d)
Let-7-P1d chr11: 122146523-122146589 [-] UCSC Ensembl
Mir-10-P2d chr11: 122152240-122152296 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAGAGAAGAUAUUGAGGCCUGUUGCCACAAACCCGUAGAUCCGAACUUGUGGUAUUAGUCCGCACAAGCUUGUAUCUAUAGGUAUGUGUCUGUUAGGCAAUCUCACGGACCUGGGG
Get precursor sequence
Structure
        10         20         30        40        50        
AGAGAGAAGAUAUUGAG-     UUGC-|   A   CG     C   A      GUAUU 
                  GCCUG     CACA ACC  UAGAU CGA CUUGUG     \
                  CGGAU     GUGU UGG  AUCUA GUU GAACAC     A
GGGGUCCAGGCACUCUAA     UGUCU^   A   AU     U   C      GCCUG 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-10-P2d_5p

mirBase accessionMIMAT0000098
Sequence
0- AACCCGUAGAUCCGAACUUGUG -22
Get sequence
Proposed targets microrna.org: MIMAT0000098
TargetScanVert: hsa-miR-100-5p
TargetMiner: hsa-miR-100-5p
miRDB: MIMAT0000098
Star sequence

Hsa-Mir-10-P2d_3p*

mirBase accessionMIMAT0004512
Sequence
35- CAAGCUUGUAUCUAUAGGUAUG -57
Get sequence
Proposed targets microrna.org: MIMAT0004512
TargetScanVert: hsa-miR-100-3p
TargetMiner: hsa-miR-100-3p
miRDB: MIMAT0004512