Mir
Gene
DB
2.1
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43 microRNA genes with seed AUGACAC
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
▲
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Cbr-Mir-64-o1
cbr-mir-64c
MIR-64
AUGACAC
MIMAT0029603
None
III
869360
869420
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-64-o2
cbr-mir-64a
MIR-64
AUGACAC
MIMAT0001292
None
III
869227
869290
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-64-o3
cbr-mir-64b
MIR-64
AUGACAC
None
MIMAT0011490
III
869105
869166
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-64-o4
cbr-mir-65
MIR-64
AUGACAC
MIMAT0011484
MIMAT0011485
III
868825
868890
-
C. briggsae
Caenorhabditis
No
Cel-Mir-229
cel-mir-229
MIR-229
AUGACAC
MIMAT0000284
MIMAT0015112
chrIII
2172459
2172561
+
C. elegans
C. elegans
No
1
Cel-Mir-63
cel-mir-63
MIR-63
AUGACAC
MIMAT0015104
MIMAT0000035
chrX
17598785
17598849
-
C. elegans
C. elegans
No
Cel-Mir-64-P1
cel-mir-64
MIR-64
AUGACAC
MIMAT0000036
MIMAT0015105
chrIII
2172869
2172936
+
C. elegans
Caenorhabditis
No
Cel-Mir-64-P2
cel-mir-65
MIR-64
AUGACAC
MIMAT0000037
MIMAT0015106
chrIII
2173019
2173080
+
C. elegans
Caenorhabditis
No
Cel-Mir-64-P3
cel-mir-66
MIR-64
AUGACAC
MIMAT0000038
MIMAT0020315
chrIII
2173124
2173188
+
C. elegans
Caenorhabditis
No
Tgu-Mir-425
tgu-mir-425
MIR-425
AUGACAC
MIMAT0014470
MIMAT0014471
12
8756804
8756866
-
Gnathostomata
Gnathostomata
No
1
Sto-Mir-425
None
MIR-425
AUGACAC
None
None
BFAA01003406.1
122844
122905
+
Gnathostomata
Gnathostomata
Unknown
1
1
Hsa-Mir-425
hsa-mir-425
MIR-425
AUGACAC
MIMAT0003393
MIMAT0001343
chr3
49020159
49020221
-
Gnathostomata
Gnathostomata
No
1
Ami-Mir-425
ami-mir-425
MIR-425
AUGACAC
MIMAT0038277
MIMAT0038278
NW_017710564.1
64139
64201
+
Gnathostomata
Gnathostomata
No
1
Cmi-Mir-425
None
MIR-425
AUGACAC
None
None
KI635869.1
3897454
3897514
-
Gnathostomata
Gnathostomata
No
1
Mml-Mir-425
mml-mir-425
MIR-425
AUGACAC
MIMAT0006324
None
chr2
93359195
93359257
+
Gnathostomata
Gnathostomata
No
1
Cpi-Mir-425
cpi-mir-425
MIR-425
AUGACAC
MIMAT0037875
MIMAT0037876
JH584670
1165773
1165833
-
Gnathostomata
Gnathostomata
No
1
Mmu-Mir-425
mmu-mir-425
MIR-425
AUGACAC
MIMAT0004750
MIMAT0001342
chr9
108568789
108568851
+
Gnathostomata
Gnathostomata
No
1
Aca-Mir-425
aca-mir-425
MIR-425
AUGACAC
MIMAT0021954
MIMAT0021955
2
187863035
187863096
-
Gnathostomata
Gnathostomata
No
Rno-Mir-425
rno-mir-425
MIR-425
AUGACAC
MIMAT0005314
MIMAT0017306
chr8
117354831
117354893
+
Gnathostomata
Gnathostomata
No
1
Pbv-Mir-425
pbv-mir-425
MIR-425
AUGACAC
MIMAT0039048
MIMAT0039049
KE954653.1
223828
223889
+
Gnathostomata
Gnathostomata
No
Cpo-Mir-425
cpo-mir-425
MIR-425
AUGACAC
MIMAT0047245
MIMAT0047246
scaffold_8
24185548
24185610
-
Gnathostomata
Gnathostomata
No
1
Gja-Mir-425
None
MIR-425
AUGACAC
None
None
NW_015173131.1
772282
772343
+
Gnathostomata
Gnathostomata
Unknown
Ocu-Mir-425
ocu-mir-425
MIR-425
AUGACAC
MIMAT0048445
MIMAT0048446
chr9
16649322
16649384
-
Gnathostomata
Gnathostomata
No
1
Spt-Mir-425
None
MIR-425
AUGACAC
None
None
QEPC01014177.1
29597
29658
+
Gnathostomata
Gnathostomata
Unknown
1
Cfa-Mir-425
cfa-mir-425
MIR-425
AUGACAC
MIMAT0006639
None
chr20
40144613
40144675
+
Gnathostomata
Gnathostomata
No
Bta-Mir-425
bta-mir-425
MIR-425
AUGACAC
MIMAT0003832
MIMAT0003833
NC_037349.1
50971475
50971537
+
Gnathostomata
Gnathostomata
No
1
Xtr-Mir-425
xtr-mir-425
MIR-425
AUGACAC
MIMAT0003640
None
chr4
126189462
126189524
-
Gnathostomata
Gnathostomata
No
1
Dno-Mir-425
dno-mir-425
MIR-425
AUGACAC
MIMAT0047884
MIMAT0047885
JH564313
2587714
2587776
+
Gnathostomata
Gnathostomata
No
1
Mun-Mir-425
None
MIR-425
AUGACAC
None
None
425_LR594637.1:139796983-139797121
39
101
-
Gnathostomata
Gnathostomata
Unknown
1
Ete-Mir-425
None
MIR-425
AUGACAC
None
None
JH980310
54502
54564
+
Gnathostomata
Gnathostomata
No
1
Sha-Mir-425
None
MIR-425
AUGACAC
None
None
GL841583.1
1571636
1571698
-
Gnathostomata
Gnathostomata
No
1
Tni-Mir-425
None
MIR-425
AUGACAC
None
None
9
665884
665947
+
Gnathostomata
Gnathostomata
No
1
Mdo-Mir-425
mdo-mir-425
MIR-425
AUGACAC
MIMAT0026697
MIMAT0004153
6
201968561
201968623
-
Gnathostomata
Gnathostomata
No
1
Gmo-Mir-425
gmo-mir-731
MIR-425
AUGACAC
MIMAT0044114
None
GeneScaffold_1201
84822
84885
+
Gnathostomata
Gnathostomata
No
1
Oan-Mir-425
oan-mir-425
MIR-425
AUGACAC
MIMAT0007154
MIMAT0007155
NC_041749.1
91030435
91030497
-
Gnathostomata
Gnathostomata
No
1
Mal-Mir-425
None
MIR-425
AUGACAC
None
None
KV884993.1
275466
275526
-
Gnathostomata
Gnathostomata
No
1
Gga-Mir-425
None
MIR-425
AUGACAC
None
None
12
12045651
12045713
+
Gnathostomata
Gnathostomata
No
1
Dre-Mir-425
dre-mir-731
MIR-425
AUGACAC
MIMAT0003761
None
chr8
26082548
26082611
+
Gnathostomata
Gnathostomata
No
1
Cli-Mir-425
cli-mir-425
MIR-425
AUGACAC
MIMAT0038632
MIMAT0038633
scaffold277
2757276
2757337
+
Gnathostomata
Gnathostomata
No
1
Loc-Mir-425
None
MIR-425
AUGACAC
None
None
LG5
50273200
50273262
-
Gnathostomata
Gnathostomata
No
1
Mmu-Mir-489
mmu-mir-489
MIR-489
AUGACAC
MIMAT0022704
MIMAT0003112
chr6
3721922
3721981
-
Osteichthyes
Osteichthyes
No
1
Xla-Mir-425-P1
xla-mir-425-1
MIR-425
AUGACAC
MIMAT0046592
MIMAT0046593
NC_030730.1
131952638
131952700
-
X. laevis
Gnathostomata
No
1
Xla-Mir-425-P2
xla-mir-425-2
MIR-425
AUGACAC
MIMAT0046592
MIMAT0046594
NC_030731.1
109581732
109581794
-
X. laevis
Gnathostomata
No
1
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