MirGeneDB 2.1
MirGeneDB ID

Cel-Mir-64-P2

Family name MIR-64 (all species)
Seed AUGACAC
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-65
Paralogues Cel-Mir-64-P1  Cel-Mir-64-P3 
Orthologues Cbr-Mir-64-o2 
Node of Origin (locus) C. elegans
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrIII: 2173019-2173080 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-64-P2)		 Mir-229 chrIII: 2172459-2172561 [+] UCSC Ensembl
Mir-64-P1 chrIII: 2172869-2172936 [+] UCSC Ensembl
Mir-64-P2 chrIII: 2173019-2173080 [+] UCSC Ensembl
Mir-64-P3 chrIII: 2173124-2173188 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUCUUGGAGCCAUGGAGCCUUCGCCGAUUAUGACACUGAAGCGUAACCGAACACCAUAUUUUGAGAUUCUGCUACGCGCAGUGCCAUGCUCGGCGCGUUGGCUCCAUUAAAAAACGGCCA
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Structure
        10        20          30        40        50        60 
UGCUCUUGGAGCCAUGGA   UU--|     U    A     AA     ACC   CACCAUA 
                  GCC    CGCCGA UAUG CACUG  GCGUA   GAA       \
                  CGG    GCGGCU GUAC GUGAC  CGCAU   CUU       U
ACCGGCAAAAAAUUACCU   UUGC^     C    C     G-     CGU   AGAGUUU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Wt Da Ea Mi Yo Yo
Mature sequence

Cel-Mir-64-P2_5p
mirBase accessionMIMAT0000037
Sequence 
0- UAUGACACUGAAGCGUAACCGAA -23
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Proposed targets microrna.org: MIMAT0000037
TargetScanWorm: cel-miR-65
Star sequence

Cel-Mir-64-P2_3p*
mirBase accessionMIMAT0015106
Sequence 
40- CUGCUACGCGCAGUGCCAUGCU -62
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Proposed targets microrna.org: MIMAT0015106