MirGeneDB 2.1

25 microRNA genes with node of origin Xenopus

						Sort by genome coordinates							Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	3' NTU	UG	UGUG	CNNC
Xtr-Mir-34-P2a1	xtr-mir-34b-2	MIR-34	GGCAGUG	MIMAT0003579	None	chr7	75059640	75059700	-	Xenopus	Bilateria	No
Xtr-Mir-34-P2a2	xtr-mir-34b-1	MIR-34	GGCAGUG	MIMAT0003579	None	chr7	75066361	75066422	+	Xenopus	Bilateria	No
Xtr-Mir-34-P2b1	None	MIR-34	GGCAGUG	None	None	chr7	75066635	75066689	+	Xenopus	Bilateria	Unknown			1
Xtr-Mir-34-P2b2	None	MIR-34	GGCAGUG	None	None	chr7	75057976	75058030	-	Xenopus	Bilateria	No
Xtr-Mir-142-P1a-v1	xtr-mir-142-1	MIR-142	AUAAAGU	MIMAT0003602	MIMAT0003603	chr2	38445593	38445652	+	Xenopus	Vertebrata	No			1
Xtr-Mir-142-P1a-v2	xtr-mir-142-1	MIR-142	UAGUGUU	MIMAT0003602	MIMAT0003603	chr2	38445593	38445652	+	Xenopus	Vertebrata	No			1
Xtr-Mir-142-P1a-v3	xtr-mir-142-1	MIR-142	GUAGUGU	MIMAT0003602	MIMAT0003603	chr2	38445593	38445652	+	Xenopus	Vertebrata	No			1
Xtr-Mir-142-P1a-v4	xtr-mir-142-1	MIR-142	CCAUAAA	MIMAT0003602	MIMAT0003603	chr2	38445591	38445654	+	Xenopus	Vertebrata	No
Xtr-Mir-142-P1b-v1	xtr-mir-142-2	MIR-142	AUAAAGU	MIMAT0003602	MIMAT0003603	chr2	38446775	38446834	+	Xenopus	Vertebrata	No			1
Xtr-Mir-142-P1b-v2	xtr-mir-142-2	MIR-142	UAGUGUU	MIMAT0003602	MIMAT0003603	chr2	38446775	38446834	+	Xenopus	Vertebrata	No			1
Xtr-Mir-142-P1b-v3	xtr-mir-142-2	MIR-142	GUAGUGU	MIMAT0003602	MIMAT0003603	chr2	38446775	38446834	+	Xenopus	Vertebrata	No			1
Xtr-Mir-142-P1b-v4	xtr-mir-142-2	MIR-142	CCAUAAA	MIMAT0003602	MIMAT0003603	chr2	38446773	38446836	+	Xenopus	Vertebrata	No
Xtr-Mir-430-o4	None	MIR-430	CUGACAA	None	None	chr1	59518864	59518921	-	Xenopus	Vertebrata	Unknown
Xtr-Mir-430-o6	None	MIR-430	AAGUGCU	None	None	chrUn_NW_016683591v1	115715	115774	-	Xenopus	Vertebrata	No			1
Xtr-Mir-430-o7	xtr-mir-428a	MIR-430	GGCCUAA	None	MIMAT0003709	chrUn_NW_016683591v1	115429	115489	-	Xenopus	Vertebrata	No			1
Xtr-Mir-430-o8	xtr-mir-428b	MIR-430	AAGUGCU	None	MIMAT0035362	chrUn_NW_016683591v1	115047	115105	-	Xenopus	Vertebrata	No		1	1
Xtr-Novel-3	None	XEN-NOVEL-3	GCUGGAG	None	None	chr9	24365337	24365393	+	Xenopus	Xenopus	No
Xtr-Novel-4	None	XEN-NOVEL-4	CCACUAG	None	None	chr7	62852538	62852594	-	Xenopus	Xenopus	No
Xtr-Novel-5	None	XEN-NOVEL-5	UCCCCUU	None	None	chr8	75923129	75923189	-	Xenopus	Xenopus	No	1
Xtr-Novel-6	None	XEN-NOVEL-6	CACCGAU	None	None	chr9	29268997	29269060	+	Xenopus	Xenopus	No			1
Xtr-Novel-7	None	XEN-NOVEL-7	UUCCUGC	None	None	chr1	98200860	98200928	+	Xenopus	Xenopus	No			1
Xtr-Novel-8	None	XEN-NOVEL-8	GAAGUGA	None	None	chr3	989597	989652	+	Xenopus	Xenopus	No			1
Xtr-Novel-9	None	XEN-NOVEL-9	AGGGAUC	None	None	chr6	71836723	71836780	+	Xenopus	Xenopus	No			1
Xtr-Novel-10	None	XEN-NOVEL-10	GAUCGGA	None	None	chr7	23094426	23094488	-	Xenopus	Xenopus	Unknown
Xtr-Novel-11	None	XEN-NOVEL-11	UGCUGAC	None	None	chr1	78077403	78077458	-	Xenopus	Xenopus	No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all