MirGeneDB 3.0
MirGeneDB ID

Xla-Novel-11

Family name XLA-NOVEL-11 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) X. laevis
Node of Origin (family) X. laevis
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030738.1: 88272754-88272817 [-] UCSC Ensembl
Seed AGCAGUG
Precursor
(pre-Mir +30nt flank)		 
AUACAUUCCGAUACUUUCUGGACUGCAAGUAAGCAGUGUGCAGGGUUGUUUUUUAAUACUAACUCAAUGAGGAACAAACCUGCACACUGCUAUCUUGCAGUCUAGACUUCAGAGCACUGCUUAU
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Structure
        10          20        30        40        50        60 
AUACAUUCCGAUACUUU--|           UA             G       UUAAUACU 
                   CUGGACUGCAAG  AGCAGUGUGCAGG UUGUUUU        A
                   GAUCUGACGUUC  UCGUCACACGUCC AACAAGG        A
UAUUCGUCACGAGACUUCA^           UA             A       AGUAACUC 
  120       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
- +
Em
Mature sequence

Xla-Novel-11_5p
mirBase accessionNone
Sequence 
0- AAGCAGUGUGCAGGGUUGUUUU -22
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Star sequence

Xla-Novel-11_3p*
mirBase accessionNone
Sequence 
42- AACAAACCUGCACACUGCUAUC -64
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