MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-12479-P1

Family name MIR-12479 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-12479-P2 
Orthologues Xtr-Mir-12479 
Node of Origin (locus) X. laevis
Node of Origin (family) Xenopus
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030737.1: 45448257-45448313 [+] UCSC Ensembl
Seed CCACUAG
Precursor
(pre-Mir +30nt flank)		 
ACUUGCUUACCUCUUGCAGUAACUAAGCUUACCACUAGACGCUGCUGCACUGCAGGCUACAAAUGCUGCAGCGCCACCUGGUGGAGAGUUGAGGCUGCACCAGAUUCAGAGGGAAAA
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Structure
        10         20         30           40        50      
ACUUGCUUACCUCUUGCA-   A-  A     A       A---|     U   CUGCAG 
                   GUA  CU AGCUU CCACUAG    CGCUGC GCA      G
                   CGU  GA UUGAG GGUGGUC    GCGACG CGU      C
AAAAGGGAGACUUAGACCA   CG  G     A       CACC^     U   AAACAU 
     110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
- +
Em
Mature sequence

Xla-Mir-12479-P1_5p
mirBase accessionNone
Sequence 
0- ACCACUAGACGCUGCUGCACUGC -23
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Star sequence

Xla-Mir-12479-P1_3p*
mirBase accessionNone
Sequence 
35- CUGCAGCGCCACCUGGUGGAGA -57
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