| MirGeneDB ID | Tgu-Mir-9619 |
|---|
| Family name |
MIR-9619 (all species) |
|---|
| Seed |
AUUCCUU |
|---|
| Species |
Zebra finch (Taeniopygia guttata) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cli-Mir-9619
|
|---|
| Node of Origin (locus) |
Neoaves
|
|---|
| Node of Origin (family) |
Neoaves
|
|---|
Genome context
(TaeGut1_add) |
Tgu-Mir-9619_pre_NC_045007.1:20661207-20661351: 45-101 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GUUUGAUUGUCUGUUGUGAGCUUAAUCCUAUAUUCCUUAAGUAGACAAAGAUGAUUCUUUCCCAGUUUUGCCUGCUUAAGGGAUAGAGGAAUAGGCUCUAAGUCUGAAGUGUUUAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUUUGAUUGUCUGUUGU--| A A A AUGAUUC
GAGCUUA UCCU UAUUCCUUAAGUAG CAAAG \
CUCGGAU AGGA AUAGGGAAUUCGUC GUUUU U
UGAUUUGUGAAGUCUGAAU^ A G C GACCCUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Tgu-Mir-9619_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAUUCCUUAAGUAGACAAAGAU -22
Get sequence
|
|---|
| Co-mature sequence |
Tgu-Mir-9619_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UUUUGCCUGCUUAAGGGAUAGA -57
Get sequence
|
|---|
