| MirGeneDB ID | Tgu-Mir-2965 |
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| Family name |
MIR-2965 (all species) |
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| Species |
Zebra finch (Taeniopygia guttata) |
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| MiRBase ID |
tgu-mir-2965
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
T. guttata
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| Node of Origin (family) |
T. guttata
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Genome context
(TaeGut1_add) |
Tgu-Mir-2965_pre_7:10597576-10597715: 40-101 [-]
UCSC
Ensembl
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| Seed |
AGGACUG |
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Precursor
(pre-Mir +30nt flank) |
GUGCUGCCUGUUGCUCUGGGGCUCCAGCUGCAGGACUGCCUCAGAGAGCAGGCUGGUGAACAGAACAGAGCCUGGCCUGAGUCUGUCCUAUCUCUGGAGCUUUCUCUGAACCCUGGCGUGGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GUGCUGCCUGUUGCUCU--| CUGC UGC AGAG GGUGAA
GGGGCUCCAG AGGAC CUCAG CAGGCU C
UUUCGAGGUC UCCUG GAGUC GUCCGA A
GGGUGCGGUCCCAAGUCUC^ UCUA UCU CG-- GACAAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Mature sequence |
Tgu-Mir-2965_5p |
| mirBase accession | None |
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| Sequence |
0- CAGGACUGCCUCAGAGAGCAGGCU -24
Get sequence
|
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| Star sequence |
Tgu-Mir-2965_3p* |
| mirBase accession | MIMAT0014468 |
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| Sequence |
40- CCUGGCCUGAGUCUGUCCUAUC -62
Get sequence
|
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