MirGeneDB 2.1
MirGeneDB ID

Sme-Mir-2159

Family name MIR-2159 (all species)
Seed GCCUUUU
Species Freshwater planarian (Schmidtea mediterranea)
MiRBase ID sme-mir-2159
Paralogues
Orthologues
Node of Origin (locus) S. mediterranea
Node of Origin (family) S. mediterranea
Genome context
(Sme_GCA_002600895.1_ASM260089v1_alt)		 NNSW01000024_dd_Smes_g4_24: 706635-706691 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAUUUUUUAAAUGCAAAUGAAUUCAAAACUGCCUUUUCUUUGAGUAGCUGUCCGCAGACAGGUGGAGCUGCCAAAUAAAGGGUGAUUUGGAAUUCAUUCAUCGUAACAAAUUUGAU
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Structure
        10          20        30        40        50         
GAAUUUUUUAAAUGCAA--|       A   CU       C    A     UG    CAG 
                   AUGAAUUC AAA  GCCUUUU UUUG GUAGC  UCCG   A
                   UACUUAAG UUU  UGGGAAA AAAC CGUCG  AGGU   C
UAGUUUAAACAAUGCUACU^       G   AG       U    -     --    GGA 
     110       100        90        80         70          60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Se Se Se Se Se Se Se Se Se Se Se Se Ne Wh Wh Wh
Mature sequence

Sme-Mir-2159_5p
mirBase accessionMIMAT0011252
Sequence 
0- UGCCUUUUCUUUGAGUAGCUGUCCG -25
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Co-mature sequence

Sme-Mir-2159_3p
mirBase accessionMIMAT0012150
Sequence 
35- GAGCUGCCAAAUAAAGGGUGAU -57
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