| MirGeneDB ID | Sko-Mir-4831 |
|---|
| Family name |
MIR-4831 (all species) |
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| Seed |
UCGGCAA |
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| Species |
Saccoglossus (Saccoglossus kowalevskii) |
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| MiRBase ID |
sko-mir-4831
|
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| Paralogues |
|
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| Orthologues |
Pfl-Mir-4831
|
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| Node of Origin (locus) |
Enteropneusta
|
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| Node of Origin (family) |
Enteropneusta
|
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Genome context
(Skow_1.1) |
NW_003120434.1: 28404-28464 [-]
|
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Precursor
(pre-Mir +30nt flank) |
UUUGGAAAGCCUUUGCGUGUUCUAGUGUCAGCAGAGUACAUCUUGCUGUAAAUGAGAAGUUAAUGUAUUUCGGCAAAUUGUACUCUCGCUAACAACUGGNNNNNNNNNNNNNNNNNNNNNN
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUGGAAAGCCUUUGCGUGUU- - C -| UC U GAGAAG
CUAG UGU AGC AGAGUACA UUGCUG AAAU \
GGUC ACA UCG UCUCAUGU AACGGC UUUA U
NNNNNNNNNNNNNNNNNNNNNN A A C^ UA - UGUAAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Sko-Mir-4831_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- GCAGAGUACAUCUUGCUGUAAAU -23
Get sequence
|
|---|
| Mature sequence |
Sko-Mir-4831_3p |
| mirBase accession | MIMAT0020045 |
|---|
| Sequence |
38- UUCGGCAAAUUGUACUCUCGCUA -61
Get sequence
|
|---|
