MirGeneDB 2.1
MirGeneDB ID

Sko-Mir-4826

Family name MIR-4826 (all species)
Seed AUCCGAU
Species Saccoglossus (Saccoglossus kowalevskii)
MiRBase ID sko-mir-4826
Paralogues
Orthologues Pfl-Mir-4826 
Node of Origin (locus) Enteropneusta
Node of Origin (family) Enteropneusta
Genome context
(Skow_1.1)		 NW_003111485.1: 19771-19832 [+]
Precursor
(pre-Mir +30nt flank)
CCCGAAUAUGGCAAAGUUGUUGCUACUGGCCAUCCGAUAACAAGUGUUGGAUAUGGAAUCAAGCACGAAUCCAACACUUCAAAUCGGAUCGUCGGUAGCGAUGUCAAACUACAAUAGAAAAU
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Structure
        10          20        30        40        50        60
CCCGAAUAUGGCAAAGUU--|           C       AAC           AUGGAAU 
                    GUUGCUACUGGC AUCCGAU   AAGUGUUGGAU       C
                    UAGCGAUGGCUG UAGGCUA   UUCACAACCUA       A
UAAAAGAUAACAUCAAACUG^           C       AAC           AGCACGA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sko-Mir-4826_5p
mirBase accessionMIMAT0020032
Sequence 
0- CAUCCGAUAACAAGUGUUGGAUA -23
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Star sequence

Sko-Mir-4826_3p*
mirBase accessionMIMAT0020033
Sequence 
39- UCCAACACUUCAAAUCGGAUCGU -62
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