| MirGeneDB ID | Sha-Mir-7250 |
|---|
| Family name |
MIR-7250 (all species) |
|---|
| Species |
Tasmanian devil (Sarcophilus harrisii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Mdo-Mir-7250
Neu-Mir-7250
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(DEVIL_add) |
GL834588.1: 1662335-1662394 [+]
UCSC
Ensembl
|
|---|
| Seed |
ACGGCCC |
|---|
Precursor
(pre-Mir +30nt flank) |
CUACCGGGAAGCUUUGUGACCUUGUGGUUCUACGGCCCCUCCAGGGAACCACGUGCAUCAGGGAACUACGUGGCCCCAGGAGAGGAUGGAACCACAUGGCUCCAGAGAUGGCAGCAGGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUACCGGGAAGCUUUGU- -| U CGG C A AA CAUCA
GA CC UGUGGUUCUA CC CUCC GGG CCACGUG \
CU GG ACACCAAGGU GG GAGG CCC GGUGCAU G
ACGGACGACGGUAGAGAC C^ U A-- A A C- CAAGG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Sha-Mir-7250_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UACGGCCCCUCCAGGGAACCACGUG -25
Get sequence
|
|---|
| Star sequence |
Sha-Mir-7250_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CGUGGCCCCAGGAGAGGAUGGA -60
Get sequence
|
|---|
