| MirGeneDB ID | Pma-Mir-126-o1 |
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| Family name |
MIR-126 (all species) |
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| Species |
Sea Lamprey (Petromyzon marinus) |
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| MiRBase ID |
pma-mir-126
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| Paralogues |
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| Orthologues |
Ebu-Mir-126-o1
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| Node of Origin (locus) |
P. marinus
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| Node of Origin (family) |
Olfactores
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Genome context
(GCF_010993605.1_kPetMar1.pri_genomic) |
NC_046073.1: 1914711-1914768 [+]
UCSC
Ensembl
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| Seed |
CGUACCG |
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Precursor
(pre-Mir +30nt flank) |
GGGUGUUUGGGAAAUCCGGCAGUGCCCCCGCGUUAUUUCCCGGGGUACGCGCCGCGCUCUGUCGCCUCGUACCGUGAGUAAUAACGUGGGGUCCCUGCUGCUGCUGCUACGGGGUUAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGGUGUUUGGGAAAUCC-- UGC UCC G C-| CGCGC
GGCAG CCCCGCGUUAUU CG GGUACG GC \
UCGUC GGGGUGCAAUAA GU CCAUGC CG U
CAUUGGGGCAUCGUCGUCG CCU UGA G UC^ CUGUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Gi |
Gu |
He |
Ki |
La |
Li |
Mo |
Mu |
Sk |
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| Star sequence |
Pma-Mir-126-o1_5p* |
| mirBase accession | None |
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| Sequence |
0- CGUUAUUUCCCGGGGUACGCGC -22
Get sequence
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| Mature sequence |
Pma-Mir-126-o1_3p |
| mirBase accession | MIMAT0019448 |
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| Sequence |
36- UCGUACCGUGAGUAAUAACGUG -58
Get sequence
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