| MirGeneDB ID | Pab-Mir-7854 |
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| Family name |
MIR-7854 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hsa-Mir-7854
|
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| Node of Origin (locus) |
Hominidae
|
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| Node of Origin (family) |
Hominidae
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054697.2: 80948505-80948565 [+]
UCSC
Ensembl
|
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| Seed |
GAGGUGG |
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Precursor
(pre-Mir +30nt flank) |
CAGGAGGCAGUGAACCUCUCCUGCCCCUUCCUUCCAUCUUCAUCACCUUGAGCAUCUUCUGGGCAGCUGAGGUGGCCGCAGAUGGGAAGGAAGGGCCCAGAGAUGAGGAUUUUCUUCUCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAGGAGGCAGUGAACCUC - C- - UCA-| G CAUCUU
UC CUG CCCUUCCUU CCAUCU UCACCUU AG C
AG GAC GGGAAGGAA GGUAGA GGUGGAG UC U
CUCUCUUCUUUUAGGAGU A CC G CGCC^ - GACGGG
. 110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-7854_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CUUCCAUCUUCAUCACCUUGAG -22
Get sequence
|
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| Mature sequence |
Pab-Mir-7854_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- UGAGGUGGCCGCAGAUGGGAAGGA -61
Get sequence
|
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